Keele Research Repository

Crowther, M, Grozinger, L, Pocock, M, Taylor, CPD, McLaughlin, JA, Misirli, G ORCID: https://orcid.org/0000-0002-2454-7188, Bartley, B, Beal, J, Goni-Moreno, A and Wipat, A (2020) ShortBOL: A language for scripting designs for engineered biological systems using SyntheticBiology Open Language (SBOL). ACS Synthetic Biology, 9 (4). pp. 962-966.

Text acssynbio.9b00470.pdf - Accepted Version Restricted to Repository staff only until 4 March 2021. Available under License Creative Commons Attribution Non-commercial. Download (475kB)

Abstract

The Synthetic Biology Open Language (SBOL) is an emerging synthetic biology data exchange standard, designed primarily for unambiguous and efficient machine-to-machine communication. However, manual editing of SBOL is generally difficult for non-trivial designs. Here, we describe ShortBOL, a light-weight SBOL scripting language that bridges the gap between manual editing, visual design tools, and direct programming. ShortBOL is a shorthand textual language developed to enable users to create SBOL designs quickly and easily, without requiring strong programming skills or visual design tools.

Item Type:	Article
Additional Information:	The final accepted manuscript and all relevant information can be found at; https://pubs.acs.org/doi/10.1021/acssynbio.9b00470
Uncontrolled Keywords:	ShortBOL, scripting designs, engineered, biological systems, synthetic biology, open language.
Subjects:	Q Science > Q Science (General) T Technology > T Technology (General)
Divisions:	Faculty of Natural Sciences > School of Computing and Mathematics
Related URLs:	Author
Depositing User:	Symplectic
Date Deposited:	11 Mar 2020 12:15
Last Modified:	07 May 2020 09:56
URI:	https://eprints.keele.ac.uk/id/eprint/7787

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