Keele Research Repository
Explore the Repository
Hunt, VL, Tsai, IJ, Coghlan, A, Reid, AJ, Holroyd, N, Foth, BJ, Tracey, A, Cotton, JA, Stanley, EJ, Beasley, H, Bennett, HM, Brooks, K, Harsha, B, Kajitani, R, Kulkarni, A, Harbecke, D, Nagayasu, E, Nichol, S, Ogura, Y, Quail, MA, Randle, N, Xia, D, Brattig, NW, Soblik, H, Ribeiro, DM, Sanchez-Flores, A, Hayashi, T, Itoh, T, Denver, DR, Grant, W, Stoltzfus, JD, Lok, JB, Murayama, H, Wastling, J, Streit, A, Kikuchi, T, Viney, M and Berriman, M (2016) The genomic basis of parasitism in the Strongyloides clade of nematodes. Nature Genetics, 48 (3). 299 - 307. ISSN 1546-1718
The genomic basis of parasitism in the Strongyloides clade of nematodes.pdf - Published Version
Available under License Creative Commons Attribution Non-commercial Share Alike.
Download (2MB) | Preview
Abstract
Soil-transmitted nematodes, including the Strongyloides genus, cause one of the most prevalent neglected tropical diseases. Here we compare the genomes of four Strongyloides species, including the human pathogen Strongyloides stercoralis, and their close relatives that are facultatively parasitic (Parastrongyloides trichosuri) and free-living (Rhabditophanes sp. KR3021). A significant paralogous expansion of key gene families--families encoding astacin-like and SCP/TAPS proteins--is associated with the evolution of parasitism in this clade. Exploiting the unique Strongyloides life cycle, we compare the transcriptomes of the parasitic and free-living stages and find that these same gene families are upregulated in the parasitic stages, underscoring their role in nematode parasitism.
Item Type: | Article |
---|---|
Uncontrolled Keywords: | Gene Expression; Genome Informatics; Genomics; Sequencing |
Subjects: | Q Science > QH Natural history Q Science > QH Natural history > QH426 Genetics |
Divisions: | Faculty of Natural Sciences > School of Life Sciences |
Related URLs: | |
Depositing User: | Symplectic |
Date Deposited: | 11 May 2017 10:17 |
Last Modified: | 11 May 2017 10:17 |
URI: | https://eprints.keele.ac.uk/id/eprint/3405 |