Skip to main content

Research Repository

Advanced Search

ShortBOL: A language for scripting designs for engineered biological systems using SyntheticBiology Open Language (SBOL).

Misirli

ShortBOL: A language for scripting designs for engineered biological systems using SyntheticBiology Open Language (SBOL). Thumbnail


Authors



Abstract

The Synthetic Biology Open Language (SBOL) is an emerging synthetic biology data exchange standard, designed primarily for unambiguous and efficient machine-to-machine communication. However, manual editing of SBOL is generally difficult for non-trivial designs. Here, we describe ShortBOL, a light-weight SBOL scripting language that bridges the gap between manual editing, visual design tools, and direct programming. ShortBOL is a shorthand textual language developed to enable users to create SBOL designs quickly and easily, without requiring strong programming skills or visual design tools.

Acceptance Date Mar 1, 2020
Publication Date Apr 17, 2020
Publicly Available Date Mar 29, 2024
Journal ACS Synthetic Biology
Publisher American Chemical Society
Pages 962-966
DOI https://doi.org/10.1021/acssynbio.9b00470
Keywords ShortBOL, scripting designs, engineered, biological systems, synthetic biology, open language.
Publisher URL https://pubs.acs.org/doi/10.1021/acssynbio.9b00470

Files




You might also like



Downloadable Citations