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McLaughlin, JA, Beal, J, Misirli, G ORCID: https://orcid.org/0000-0002-2454-7188, Grünberg, R, Bartley, BA, Scott-Brown, J, Vaidyanathan, P, Fontanarrosa, P, Oberortner, E, Wipat, A, Gorochowski, TE and Myers, CJ (2020) The Synthetic Biology Open Language (SBOL) Version 3: Simplified Data Exchange for Bioengineering. Frontiers in Bioengineering and Biotechnology, 8.
Baig, H, Fontanarrosa, P, Kulkarni, V, McLaughlin, JA, Vaidyanathan, P, Bartley, B, Beal, J, Crowther, M, Gorochowski, TE, Grünberg, R, Misirli, G ORCID: https://orcid.org/0000-0002-2454-7188, Scott-Brown, J, Oberortner, E, Wipat, A and Myers, CJ (2020) Synthetic biology open language (SBOL) version 3.0.0. Journal of integrative bioinformatics, 17 (2-3).
Misirli, G ORCID: https://orcid.org/0000-0002-2454-7188, Beal, J, Gorochowski, TE, Stan, G-B, Wipat, A and Myers, CJ (2020) SBOL Visual 2 Ontology. ACS Synthetic Biology, 9 (4). pp. 972-977.
Neal, ML, König, M, Nickerson, DP, Misirli, G, Kalbasi, R, Dräger, A, Atalag, K, Chelliah, V, Cooling, MT, Cook, DL, Crook, SM, Alba, MD, Friedman, SH, Garny, A, Gennari, JH, Gleeson, P, Golebiewski, M, Hucka, M, Juty, NS, Myers, CJ, Olivier, BG, Sauro, HM, Scharm, M, Snoep, JL, Touré, V, Wipat, A, Wolkenhauer, O and Waltemath, D (2019) Harmonizing semantic annotations for computational models in biology. Briefings in Bioinformatics, 20 (2). 540 -550.
Misirli, G, Nguyen, T, McLaughlin, JA, Vaidyanathan, P, Jones, T, Densmore, D, Myers, CJ and Wipat, A (2018) A computational workflow for the automated generation of models of genetic designs. ACS Synthetic Biology, 8 (7). pp. 1548-1559.
McLaughlin, JA, Myers, CJ, Zundel, Z, Misirli, G, Zhang, M, Ofiteru, ID, Goñi Moreno, A and Wipat, A (2018) SynBioHub: A Standards-Enabled Design Repository for Synthetic Biology. ACS Synthetic Biology, 7 (2). pp. 682-688.
Myers, CJ, Beal, J, Gorochowski, TE, Kuwahara, H, Madsen, C, McLaughlin, JA, Mısırlı, G, Nguyen, T, Oberortner, E, Samineni, M, Wipat, A, Zhang, M and Zundel, Z (2017) A standard-enabled workflow for synthetic biology. Biochemical Society Transactions, 45 (3). 793 - 803.
Zhang, Z, Nguyen, T, Roehner, N, Misirli, G ORCID: https://orcid.org/0000-0002-2454-7188, Pocock, M, Oberortner, E, Samineni, M, Zundel, Z, Beal, J, Clancy, K, Wipat, A and Myers, CJ (2016) libSBOLj 2.0: A Java Library to Support SBOL 2.0. IEEE Life Sciences Letters, 1 (4). 34 - 37.